Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF11077.1 | SDG73041.1 | SAMN04488121_101822 | SAMN04488121_10663 | Starch-binding associating with outer membrane. | Beta-L-arabinofuranosidase, GH127. | 0.575 |
SDF11077.1 | SDG77380.1 | SAMN04488121_101822 | SAMN04488121_106236 | Starch-binding associating with outer membrane. | Protein of unknown function. | 0.718 |
SDF11077.1 | SDH06535.1 | SAMN04488121_101822 | SAMN04488121_108224 | Starch-binding associating with outer membrane. | Glycosyl hydrolase family 20, catalytic domain. | 0.453 |
SDF26743.1 | SDG04231.1 | SAMN04488121_1011320 | SAMN04488121_103263 | Beta-glucosidase. | Chitinase. | 0.907 |
SDF26743.1 | SDH06535.1 | SAMN04488121_1011320 | SAMN04488121_108224 | Beta-glucosidase. | Glycosyl hydrolase family 20, catalytic domain. | 0.458 |
SDF69462.1 | SDH06535.1 | SAMN04488121_102679 | SAMN04488121_108224 | Uncharacterized conserved protein YndB, AHSA1/START domain. | Glycosyl hydrolase family 20, catalytic domain. | 0.538 |
SDF73465.1 | SDG77380.1 | SAMN04488121_102808 | SAMN04488121_106236 | Predicted acyltransferase. | Protein of unknown function. | 0.462 |
SDF73465.1 | SDH06535.1 | SAMN04488121_102808 | SAMN04488121_108224 | Predicted acyltransferase. | Glycosyl hydrolase family 20, catalytic domain. | 0.610 |
SDG04231.1 | SDF26743.1 | SAMN04488121_103263 | SAMN04488121_1011320 | Chitinase. | Beta-glucosidase. | 0.907 |
SDG04231.1 | SDH06535.1 | SAMN04488121_103263 | SAMN04488121_108224 | Chitinase. | Glycosyl hydrolase family 20, catalytic domain. | 0.654 |
SDG73041.1 | SDF11077.1 | SAMN04488121_10663 | SAMN04488121_101822 | Beta-L-arabinofuranosidase, GH127. | Starch-binding associating with outer membrane. | 0.575 |
SDG73041.1 | SDG77380.1 | SAMN04488121_10663 | SAMN04488121_106236 | Beta-L-arabinofuranosidase, GH127. | Protein of unknown function. | 0.780 |
SDG73041.1 | SDH06535.1 | SAMN04488121_10663 | SAMN04488121_108224 | Beta-L-arabinofuranosidase, GH127. | Glycosyl hydrolase family 20, catalytic domain. | 0.514 |
SDG77380.1 | SDF11077.1 | SAMN04488121_106236 | SAMN04488121_101822 | Protein of unknown function. | Starch-binding associating with outer membrane. | 0.718 |
SDG77380.1 | SDF73465.1 | SAMN04488121_106236 | SAMN04488121_102808 | Protein of unknown function. | Predicted acyltransferase. | 0.462 |
SDG77380.1 | SDG73041.1 | SAMN04488121_106236 | SAMN04488121_10663 | Protein of unknown function. | Beta-L-arabinofuranosidase, GH127. | 0.780 |
SDG77380.1 | SDH06535.1 | SAMN04488121_106236 | SAMN04488121_108224 | Protein of unknown function. | Glycosyl hydrolase family 20, catalytic domain. | 0.464 |
SDH06440.1 | SDH06468.1 | SAMN04488121_108221 | SAMN04488121_108222 | Outer membrane cobalamin receptor protein. | DNA-binding beta-propeller fold protein YncE. | 0.953 |
SDH06440.1 | SDH06503.1 | SAMN04488121_108221 | SAMN04488121_108223 | Outer membrane cobalamin receptor protein. | Hypothetical protein. | 0.941 |
SDH06440.1 | SDH06535.1 | SAMN04488121_108221 | SAMN04488121_108224 | Outer membrane cobalamin receptor protein. | Glycosyl hydrolase family 20, catalytic domain. | 0.500 |
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