STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH07176.1Hypothetical protein. (552 aa)    
Predicted Functional Partners:
SDH07210.1
Hypothetical protein.
 
     0.951
SDH07132.1
Retron-type reverse transcriptase.
 
     0.791
SDH66826.1
Reverse transcriptase (RNA-dependent DNA polymerase).
 
     0.788
SDF16913.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
    0.753
SDH12906.1
HDIG domain-containing protein.
  
     0.659
SDG72463.1
TIGR02452 family protein.
  
     0.642
SDH50164.1
DNA polymerase III, epsilon subunit.
  
    0.631
SDH48246.1
HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes.
  
    0.629
SDH07236.1
Thiosulfate dehydrogenase [quinone] large subunit.
 
    0.588
SDG42094.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
    0.580
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.