STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH07713.1Hypothetical protein. (386 aa)    
Predicted Functional Partners:
SDF23594.1
Family of unknown function.
  
 
 0.816
SDF82735.1
Outer membrane receptor proteins, mostly Fe transport.
  
 
 0.816
SDG25108.1
Family of unknown function.
  
 
 0.816
SDH07431.1
Outer membrane protein beta-barrel family protein.
  
 
 0.816
SDH07743.1
Selenoprotein W-related protein.
       0.698
SDG06806.1
OmpA-OmpF porin, OOP family.
  
     0.560
SDH07677.1
Outer membrane protein beta-barrel domain-containing protein.
       0.538
SDG72019.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.476
SDG72113.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.440
SDG72091.1
Starch-binding associating with outer membrane.
  
     0.438
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.