STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH02478.1Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. (403 aa)    
Predicted Functional Partners:
SDH02506.1
Hypothetical protein.
 
  
 0.948
SDH02453.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.852
SDH02552.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.818
SDH02275.1
O-antigen ligase like membrane protein.
 
   
 0.805
SDH02638.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
 
 0.804
SDH02407.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
     0.801
SDH02717.1
Glycosyl transferases group 1.
 
     0.790
SDH02356.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.775
SDH02535.1
Asparagine synthase (glutamine-hydrolysing).
  
  
 0.773
SDH02576.1
Methyltransferase domain-containing protein.
 
     0.748
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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