Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF15281.1 | SDG61615.1 | SAMN04488121_101954 | SAMN04488121_105205 | Hypothetical protein. | Processive endocellulase. | 0.487 |
SDF15281.1 | SDH16171.1 | SAMN04488121_101954 | SAMN04488121_109128 | Hypothetical protein. | Cellulase (glycosyl hydrolase family 5). | 0.498 |
SDF83018.1 | SDG61615.1 | SAMN04488121_1021118 | SAMN04488121_105205 | Hypothetical protein. | Processive endocellulase. | 0.487 |
SDF83018.1 | SDH16171.1 | SAMN04488121_1021118 | SAMN04488121_109128 | Hypothetical protein. | Cellulase (glycosyl hydrolase family 5). | 0.498 |
SDG04231.1 | SDG61615.1 | SAMN04488121_103263 | SAMN04488121_105205 | Chitinase. | Processive endocellulase. | 0.897 |
SDG04231.1 | SDH16171.1 | SAMN04488121_103263 | SAMN04488121_109128 | Chitinase. | Cellulase (glycosyl hydrolase family 5). | 0.533 |
SDG61615.1 | SDF15281.1 | SAMN04488121_105205 | SAMN04488121_101954 | Processive endocellulase. | Hypothetical protein. | 0.487 |
SDG61615.1 | SDF83018.1 | SAMN04488121_105205 | SAMN04488121_1021118 | Processive endocellulase. | Hypothetical protein. | 0.487 |
SDG61615.1 | SDG04231.1 | SAMN04488121_105205 | SAMN04488121_103263 | Processive endocellulase. | Chitinase. | 0.897 |
SDG61615.1 | SDH16171.1 | SAMN04488121_105205 | SAMN04488121_109128 | Processive endocellulase. | Cellulase (glycosyl hydrolase family 5). | 0.595 |
SDG61615.1 | SDH16207.1 | SAMN04488121_105205 | SAMN04488121_109129 | Processive endocellulase. | Arabinogalactan endo-1,4-beta-galactosidase. | 0.410 |
SDG61615.1 | SDH16981.1 | SAMN04488121_105205 | SAMN04488121_109154 | Processive endocellulase. | Starch-binding associating with outer membrane. | 0.454 |
SDH16139.1 | SDH16171.1 | SAMN04488121_109127 | SAMN04488121_109128 | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | Cellulase (glycosyl hydrolase family 5). | 0.820 |
SDH16139.1 | SDH16207.1 | SAMN04488121_109127 | SAMN04488121_109129 | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | Arabinogalactan endo-1,4-beta-galactosidase. | 0.857 |
SDH16139.1 | SDH16242.1 | SAMN04488121_109127 | SAMN04488121_109130 | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | SusE outer membrane protein. | 0.698 |
SDH16139.1 | SDH16268.1 | SAMN04488121_109127 | SAMN04488121_109131 | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | Starch-binding associating with outer membrane. | 0.649 |
SDH16139.1 | SDH16301.1 | SAMN04488121_109127 | SAMN04488121_109132 | Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. | Iron complex outermembrane recepter protein. | 0.612 |
SDH16171.1 | SDF15281.1 | SAMN04488121_109128 | SAMN04488121_101954 | Cellulase (glycosyl hydrolase family 5). | Hypothetical protein. | 0.498 |
SDH16171.1 | SDF83018.1 | SAMN04488121_109128 | SAMN04488121_1021118 | Cellulase (glycosyl hydrolase family 5). | Hypothetical protein. | 0.498 |
SDH16171.1 | SDG04231.1 | SAMN04488121_109128 | SAMN04488121_103263 | Cellulase (glycosyl hydrolase family 5). | Chitinase. | 0.533 |
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