Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF09841.1 | SDF23468.1 | SAMN04488121_101781 | SAMN04488121_1011213 | Quinoprotein glucose dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.811 |
SDF09841.1 | SDF55873.1 | SAMN04488121_101781 | SAMN04488121_102267 | Quinoprotein glucose dehydrogenase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.513 |
SDF09841.1 | SDH17355.1 | SAMN04488121_101781 | SAMN04488121_109165 | Quinoprotein glucose dehydrogenase. | Protein of unknown function. | 0.774 |
SDF09841.1 | SDH29118.1 | SAMN04488121_101781 | SAMN04488121_110178 | Quinoprotein glucose dehydrogenase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.513 |
SDF09841.1 | SDH29138.1 | SAMN04488121_101781 | SAMN04488121_110179 | Quinoprotein glucose dehydrogenase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.513 |
SDF09841.1 | SDH29242.1 | SAMN04488121_101781 | SAMN04488121_110185 | Quinoprotein glucose dehydrogenase. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.596 |
SDF09841.1 | SDH49430.1 | SAMN04488121_101781 | SAMN04488121_11353 | Quinoprotein glucose dehydrogenase. | Nitric oxide reductase, NorZ apoprotein. | 0.800 |
SDF23468.1 | SDF09841.1 | SAMN04488121_1011213 | SAMN04488121_101781 | Glutamate synthase (NADH) large subunit. | Quinoprotein glucose dehydrogenase. | 0.811 |
SDF23468.1 | SDH17355.1 | SAMN04488121_1011213 | SAMN04488121_109165 | Glutamate synthase (NADH) large subunit. | Protein of unknown function. | 0.825 |
SDF23468.1 | SDH29242.1 | SAMN04488121_1011213 | SAMN04488121_110185 | Glutamate synthase (NADH) large subunit. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.883 |
SDF23468.1 | guaA | SAMN04488121_1011213 | SAMN04488121_10527 | Glutamate synthase (NADH) large subunit. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.944 |
SDF55873.1 | SDF09841.1 | SAMN04488121_102267 | SAMN04488121_101781 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Quinoprotein glucose dehydrogenase. | 0.513 |
SDF55873.1 | SDH17355.1 | SAMN04488121_102267 | SAMN04488121_109165 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Protein of unknown function. | 0.862 |
SDF55873.1 | SDH29118.1 | SAMN04488121_102267 | SAMN04488121_110178 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.999 |
SDF55873.1 | SDH29138.1 | SAMN04488121_102267 | SAMN04488121_110179 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.999 |
SDF55873.1 | SDH29242.1 | SAMN04488121_102267 | SAMN04488121_110185 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SDG08203.1 | SDH17355.1 | SAMN04488121_103405 | SAMN04488121_109165 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | Protein of unknown function. | 0.621 |
SDH17355.1 | SDF09841.1 | SAMN04488121_109165 | SAMN04488121_101781 | Protein of unknown function. | Quinoprotein glucose dehydrogenase. | 0.774 |
SDH17355.1 | SDF23468.1 | SAMN04488121_109165 | SAMN04488121_1011213 | Protein of unknown function. | Glutamate synthase (NADH) large subunit. | 0.825 |
SDH17355.1 | SDF55873.1 | SAMN04488121_109165 | SAMN04488121_102267 | Protein of unknown function. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.862 |
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