STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH19002.1Glyoxylase, beta-lactamase superfamily II. (332 aa)    
Predicted Functional Partners:
SDH19034.1
Peptidase family M28.
       0.773
SDF55706.1
Acyl transferase domain-containing protein.
   
 0.726
SDG40280.1
Glyoxylase, beta-lactamase superfamily II.
  
     0.682
SDE92457.1
Adenylyltransferase and sulfurtransferase.
  
 0.677
SDF07268.1
Adenylyltransferase and sulfurtransferase.
  
 0.677
SDH19061.1
2-iminobutanoate/2-iminopropanoate deaminase.
  
    0.663
SDE87381.1
Rhodanese-related sulfurtransferase.
  
 0.641
SDH29242.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.518
SDG62841.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.511
SDF56003.1
Phosphopantetheine attachment site.
   
 
 0.504
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.