STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH20325.1FtsX-like permease family protein. (782 aa)    
Predicted Functional Partners:
SDG49666.1
Putative ABC transport system ATP-binding protein.
 
 0.947
SDG49534.1
ABC-type lipoprotein export system, ATPase component.
 
 0.936
SDG49736.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.859
SDF68931.1
Putative ABC transport system ATP-binding protein.
 
 0.834
SDE87113.1
Putative ABC transport system ATP-binding protein.
 
 0.832
SDF26313.1
Putative ABC transport system ATP-binding protein.
  
 0.784
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.784
SDG49793.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.775
SDH20299.1
Hypothetical protein.
       0.709
SDF75592.1
Putative ABC transport system permease protein.
 
 
0.675
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.