STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH20580.1Ethanolamine permease. (439 aa)    
Predicted Functional Partners:
SDH20615.1
Ethanolamine ammonia-lyase heavy chain.
 
  
 0.892
SDH20646.1
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
 
  
 0.861
SDF73952.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
    
 0.687
SDG26998.1
Por secretion system C-terminal sorting domain-containing protein.
    
 0.687
SDG03927.1
Alpha-amylase.
    
 0.687
SDG15876.1
Oligo-1,6-glucosidase.
    
 0.687
SDG58958.1
Alpha amylase, catalytic domain.
    
 0.687
SDG92254.1
Glycosidase.
    
 0.687
SDH49121.1
Alpha-glucosidase.
    
 0.687
nadE
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.601
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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