STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH28646.1Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. (485 aa)    
Predicted Functional Partners:
SDH28631.1
Hypothetical protein.
 
     0.949
SDH62084.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
 
 
 0.943
SDH28685.1
Outer membrane protein, YaiO family.
 
    0.880
SDH28706.1
Glycosyl hydrolase family 67 N-terminus.
 
     0.704
SDG18317.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
  
 
 0.685
SDH28612.1
Response regulator receiver domain-containing protein.
 
     0.685
SDH55885.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
  
 
 0.644
SDH28663.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
    
0.633
SDF55706.1
Acyl transferase domain-containing protein.
   
 0.602
SDH43495.1
PAS domain S-box-containing protein.
 
  
 0.516
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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