Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF55706.1 | SDF55771.1 | SAMN04488121_102262 | SAMN04488121_102264 | Acyl transferase domain-containing protein. | Nonribosomal peptide synthetase DhbF. | 0.999 |
SDF55706.1 | SDF55873.1 | SAMN04488121_102262 | SAMN04488121_102267 | Acyl transferase domain-containing protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.999 |
SDF55706.1 | SDF55904.1 | SAMN04488121_102262 | SAMN04488121_102268 | Acyl transferase domain-containing protein. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SDF55706.1 | SDG81694.1 | SAMN04488121_102262 | SAMN04488121_106388 | Acyl transferase domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.999 |
SDF55706.1 | SDH28948.1 | SAMN04488121_102262 | SAMN04488121_110168 | Acyl transferase domain-containing protein. | Transcriptional regulator, GntR family. | 0.555 |
SDF55706.1 | SDH29066.1 | SAMN04488121_102262 | SAMN04488121_110175 | Acyl transferase domain-containing protein. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SDF55706.1 | SDH29118.1 | SAMN04488121_102262 | SAMN04488121_110178 | Acyl transferase domain-containing protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.999 |
SDF55706.1 | SDH29242.1 | SAMN04488121_102262 | SAMN04488121_110185 | Acyl transferase domain-containing protein. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SDF55771.1 | SDF55706.1 | SAMN04488121_102264 | SAMN04488121_102262 | Nonribosomal peptide synthetase DhbF. | Acyl transferase domain-containing protein. | 0.999 |
SDF55771.1 | SDF55873.1 | SAMN04488121_102264 | SAMN04488121_102267 | Nonribosomal peptide synthetase DhbF. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.999 |
SDF55771.1 | SDF55904.1 | SAMN04488121_102264 | SAMN04488121_102268 | Nonribosomal peptide synthetase DhbF. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SDF55771.1 | SDG81694.1 | SAMN04488121_102264 | SAMN04488121_106388 | Nonribosomal peptide synthetase DhbF. | Amino acid adenylation domain-containing protein. | 0.999 |
SDF55771.1 | SDH28948.1 | SAMN04488121_102264 | SAMN04488121_110168 | Nonribosomal peptide synthetase DhbF. | Transcriptional regulator, GntR family. | 0.417 |
SDF55771.1 | SDH29066.1 | SAMN04488121_102264 | SAMN04488121_110175 | Nonribosomal peptide synthetase DhbF. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SDF55771.1 | SDH29118.1 | SAMN04488121_102264 | SAMN04488121_110178 | Nonribosomal peptide synthetase DhbF. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.999 |
SDF55771.1 | SDH29242.1 | SAMN04488121_102264 | SAMN04488121_110185 | Nonribosomal peptide synthetase DhbF. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SDF55873.1 | SDF55706.1 | SAMN04488121_102267 | SAMN04488121_102262 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Acyl transferase domain-containing protein. | 0.999 |
SDF55873.1 | SDF55771.1 | SAMN04488121_102267 | SAMN04488121_102264 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Nonribosomal peptide synthetase DhbF. | 0.999 |
SDF55873.1 | SDF55904.1 | SAMN04488121_102267 | SAMN04488121_102268 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SDF55873.1 | SDG81694.1 | SAMN04488121_102267 | SAMN04488121_106388 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.999 |
page 1 of 4