STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH31476.1Putative hydrolase of the HAD superfamily. (207 aa)    
Predicted Functional Partners:
SDG66434.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.705
SDG08203.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
  0.656
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.623
SDF53184.1
Polyphosphate glucokinase.
 
 
 
  0.609
SDF19544.1
Bifunctional NMN adenylyltransferase/nudix hydrolase.
  
 
 0.599
SDH48246.1
HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes.
     
 0.588
SDG11544.1
Mannose-6-phosphate isomerase, class I.
   
 
 0.576
SDF17707.1
Outer membrane protein TolC.
  
     0.502
SDH27579.1
Hypothetical protein.
  
     0.497
SDF29707.1
5'(3')-deoxyribonucleotidase.
  
  
  0.476
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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