Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF17707.1 | SDH31476.1 | SAMN04488121_1011029 | SAMN04488121_11116 | Outer membrane protein TolC. | Putative hydrolase of the HAD superfamily. | 0.502 |
SDF19544.1 | SDG08203.1 | SAMN04488121_1011091 | SAMN04488121_103405 | Bifunctional NMN adenylyltransferase/nudix hydrolase. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.933 |
SDF19544.1 | SDH31476.1 | SAMN04488121_1011091 | SAMN04488121_11116 | Bifunctional NMN adenylyltransferase/nudix hydrolase. | Putative hydrolase of the HAD superfamily. | 0.599 |
SDF19544.1 | SDH48246.1 | SAMN04488121_1011091 | SAMN04488121_11320 | Bifunctional NMN adenylyltransferase/nudix hydrolase. | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes. | 0.919 |
SDF29707.1 | SDG08203.1 | SAMN04488121_1011406 | SAMN04488121_103405 | 5'(3')-deoxyribonucleotidase. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.826 |
SDF29707.1 | SDH31476.1 | SAMN04488121_1011406 | SAMN04488121_11116 | 5'(3')-deoxyribonucleotidase. | Putative hydrolase of the HAD superfamily. | 0.476 |
SDF53184.1 | SDG11544.1 | SAMN04488121_102193 | SAMN04488121_103515 | Polyphosphate glucokinase. | Mannose-6-phosphate isomerase, class I. | 0.463 |
SDF53184.1 | SDH31476.1 | SAMN04488121_102193 | SAMN04488121_11116 | Polyphosphate glucokinase. | Putative hydrolase of the HAD superfamily. | 0.609 |
SDG08203.1 | SDF19544.1 | SAMN04488121_103405 | SAMN04488121_1011091 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | Bifunctional NMN adenylyltransferase/nudix hydrolase. | 0.933 |
SDG08203.1 | SDF29707.1 | SAMN04488121_103405 | SAMN04488121_1011406 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 5'(3')-deoxyribonucleotidase. | 0.826 |
SDG08203.1 | SDH31476.1 | SAMN04488121_103405 | SAMN04488121_11116 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | Putative hydrolase of the HAD superfamily. | 0.656 |
SDG08203.1 | SDH48246.1 | SAMN04488121_103405 | SAMN04488121_11320 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes. | 0.936 |
SDG11544.1 | SDF53184.1 | SAMN04488121_103515 | SAMN04488121_102193 | Mannose-6-phosphate isomerase, class I. | Polyphosphate glucokinase. | 0.463 |
SDG11544.1 | SDH31476.1 | SAMN04488121_103515 | SAMN04488121_11116 | Mannose-6-phosphate isomerase, class I. | Putative hydrolase of the HAD superfamily. | 0.576 |
SDG66434.1 | SDH31476.1 | SAMN04488121_105412 | SAMN04488121_11116 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Putative hydrolase of the HAD superfamily. | 0.705 |
SDG66434.1 | guaA | SAMN04488121_105412 | SAMN04488121_10527 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.670 |
SDH27579.1 | SDH31476.1 | SAMN04488121_11098 | SAMN04488121_11116 | Hypothetical protein. | Putative hydrolase of the HAD superfamily. | 0.497 |
SDH31476.1 | SDF17707.1 | SAMN04488121_11116 | SAMN04488121_1011029 | Putative hydrolase of the HAD superfamily. | Outer membrane protein TolC. | 0.502 |
SDH31476.1 | SDF19544.1 | SAMN04488121_11116 | SAMN04488121_1011091 | Putative hydrolase of the HAD superfamily. | Bifunctional NMN adenylyltransferase/nudix hydrolase. | 0.599 |
SDH31476.1 | SDF29707.1 | SAMN04488121_11116 | SAMN04488121_1011406 | Putative hydrolase of the HAD superfamily. | 5'(3')-deoxyribonucleotidase. | 0.476 |
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