STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH63913.1Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (750 aa)    
Predicted Functional Partners:
SDF47638.1
Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.754
SDG93791.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.749
SDH12773.1
Hypothetical protein.
    0.737
SDF10130.1
Beta-glucosidase.
  
  
 
0.730
SDH63073.1
Beta-glucosidase.
    
 0.727
SDH13625.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.700
SDG16026.1
Por secretion system C-terminal sorting domain-containing protein.
   
 
 0.699
SDG57535.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
     
 0.697
SDG18317.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
    
 0.679
SDG60301.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.672
Your Current Organism:
Chitinophaga filiformis
NCBI taxonomy Id: 104663
Other names: ATCC 29495, C. filiformis, CCUG 12809, CIP 106401, DSM 527, Flexibacter filiformis, IFO 15056, JCM 21160, Myxococcus filiformis, NBRC 15056, strain Fx e1 Reichenbach
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