STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000300815_00780Unannotated protein. (348 aa)    
Predicted Functional Partners:
GCA_000300815_03441
Unannotated protein.
    
 
 0.881
GCA_000300815_01270
Unannotated protein.
   
 
 0.736
GCA_000300815_00783
Unannotated protein.
 
     0.684
GCA_000300815_00785
Unannotated protein.
  
     0.682
GCA_000300815_02711
Unannotated protein.
  
     0.567
GCA_000300815_02505
Unannotated protein.
 
  
  0.559
GCA_000300815_00267
Unannotated protein.
 
  
  0.553
GCA_000300815_00172
Unannotated protein.
  
     0.551
GCA_000300815_00079
Unannotated protein.
  
     0.546
GCA_000300815_00327
Unannotated protein.
  
     0.536
Your Current Organism:
Gayadomonas joobiniege
NCBI taxonomy Id: 1046714
Other names: Alteromonadales bacterium G-7, G. joobiniege G7, Gayadomonas joobiniege G7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.