STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000300815_00866Unannotated protein. (230 aa)    
Predicted Functional Partners:
GCA_000300815_00867
Unannotated protein.
       0.590
GCA_000300815_00868
Unannotated protein.
       0.590
GCA_000300815_00869
Unannotated protein.
       0.590
GCA_000300815_00865
Unannotated protein.
       0.548
GCA_000300815_01967
Unannotated protein.
  
     0.507
GCA_000300815_01776
Unannotated protein.
  
  
  0.467
GCA_000300815_01558
Unannotated protein.
 
   
 0.452
GCA_000300815_02025
Unannotated protein.
  
     0.427
GCA_000300815_03012
Unannotated protein.
  
     0.421
GCA_000300815_00864
Unannotated protein.
       0.416
Your Current Organism:
Gayadomonas joobiniege
NCBI taxonomy Id: 1046714
Other names: Alteromonadales bacterium G-7, G. joobiniege G7, Gayadomonas joobiniege G7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.