STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000300815_02172Unannotated protein. (468 aa)    
Predicted Functional Partners:
GCA_000300815_00312
Unannotated protein.
 
 0.984
GCA_000300815_02173
Unannotated protein.
 
  0.976
GCA_000300815_00965
Unannotated protein.
 
  0.930
GCA_000300815_01152
Unannotated protein.
 
  0.926
GCA_000300815_00964
Unannotated protein.
 
  0.925
GCA_000300815_01151
Unannotated protein.
 
  0.923
GCA_000300815_02174
Unannotated protein.
  0.906
GCA_000300815_02037
Unannotated protein.
  
 0.902
GCA_000300815_00471
Unannotated protein.
  
  0.873
GCA_000300815_01063
Unannotated protein.
  
 0.851
Your Current Organism:
Gayadomonas joobiniege
NCBI taxonomy Id: 1046714
Other names: Alteromonadales bacterium G-7, G. joobiniege G7, Gayadomonas joobiniege G7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.