STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000300815_02679Unannotated protein. (468 aa)    
Predicted Functional Partners:
GCA_000300815_01540
Unannotated protein.
    
   0.670
GCA_000300815_01762
Unannotated protein.
    
   0.622
GCA_000300815_02768
Unannotated protein.
  
    0.594
GCA_000300815_02576
Unannotated protein.
  
  
 0.544
GCA_000300815_01756
Unannotated protein.
   
  
 0.486
GCA_000300815_02176
Unannotated protein.
   
  
 0.485
GCA_000300815_01840
Unannotated protein.
     
 0.441
GCA_000300815_02479
Unannotated protein.
 
  
 0.440
GCA_000300815_02142
Unannotated protein.
   
    0.426
GCA_000300815_02144
Unannotated protein.
   
  
 0.418
Your Current Organism:
Gayadomonas joobiniege
NCBI taxonomy Id: 1046714
Other names: Alteromonadales bacterium G-7, G. joobiniege G7, Gayadomonas joobiniege G7
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.