STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000300815_03074Unannotated protein. (275 aa)    
Predicted Functional Partners:
GCA_000300815_03075
Unannotated protein.
  
  
 0.829
GCA_000300815_03073
Unannotated protein.
 
     0.718
GCA_000300815_01581
Unannotated protein.
  
     0.715
GCA_000300815_01139
Unannotated protein.
  
     0.655
GCA_000300815_02080
Unannotated protein.
  
     0.651
GCA_000300815_03076
Unannotated protein.
       0.599
GCA_000300815_01162
Unannotated protein.
  
     0.592
GCA_000300815_03085
Unannotated protein.
  
     0.560
GCA_000300815_01209
Unannotated protein.
  
     0.551
GCA_000300815_03365
Unannotated protein.
  
     0.539
Your Current Organism:
Gayadomonas joobiniege
NCBI taxonomy Id: 1046714
Other names: Alteromonadales bacterium G-7, G. joobiniege G7, Gayadomonas joobiniege G7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.