STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000403055_00424Unannotated protein. (96 aa)    
Predicted Functional Partners:
GCA_000403055_00423
Unannotated protein.
 
 
 0.999
GCA_000403055_00430
Unannotated protein.
 
    0.799
GCA_000403055_00426
Unannotated protein.
 
   
 0.760
GCA_000403055_00421
Unannotated protein.
 
  
 0.758
GCA_000403055_00427
Unannotated protein.
 
   
 0.694
GCA_000403055_00428
Unannotated protein.
 
     0.691
GCA_000403055_00425
Unannotated protein.
 
  
 0.643
GCA_000403055_00422
Unannotated protein.
       0.470
Your Current Organism:
Cloacimonetes bacterium SCGC AAA252N14
NCBI taxonomy Id: 1046965
Other names: C. bacterium SCGC AAA252-N14, Cloacimonetes bacterium SCGC AAA252-N14, candidate division KSB1 bacterium SCGC AAA252-N14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.