STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000403055_00960Unannotated protein. (398 aa)    
Predicted Functional Partners:
GCA_000403055_01429
Unannotated protein.
 
 
 0.853
GCA_000403055_01726
Unannotated protein.
  
     0.775
GCA_000403055_00959
Unannotated protein.
       0.773
GCA_000403055_01412
Unannotated protein.
  
     0.772
GCA_000403055_00961
Unannotated protein.
  
 
 
0.620
GCA_000403055_00759
Unannotated protein.
 
 
 0.594
GCA_000403055_01617
Unannotated protein.
 
   
 0.465
GCA_000403055_01385
Unannotated protein.
 
   
 0.457
GCA_000403055_00958
Unannotated protein.
       0.445
Your Current Organism:
Cloacimonetes bacterium SCGC AAA252N14
NCBI taxonomy Id: 1046965
Other names: C. bacterium SCGC AAA252-N14, Cloacimonetes bacterium SCGC AAA252-N14, candidate division KSB1 bacterium SCGC AAA252-N14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.