STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000405105_00380Unannotated protein. (990 aa)    
Predicted Functional Partners:
GCA_000405105_01082
Unannotated protein.
 
  
 0.943
GCA_000405105_00383
Unannotated protein.
  
 
  0.928
GCA_000405105_00377
Unannotated protein.
 
     0.902
GCA_000405105_01188
Unannotated protein.
 
  
  0.897
GCA_000405105_00714
Unannotated protein.
 
  
  0.891
GCA_000405105_00879
Unannotated protein.
 
  
  0.890
GCA_000405105_01224
Unannotated protein.
 
  
  0.889
GCA_000405105_01790
Unannotated protein.
 
  
  0.882
GCA_000405105_00266
Unannotated protein.
 
  
  0.881
GCA_000405105_01794
Unannotated protein.
 
  
  0.880
Your Current Organism:
Cloacimonetes bacterium SCGC AAA252P10
NCBI taxonomy Id: 1046972
Other names: C. bacterium SCGC AAA252-P10, Cloacimonetes bacterium SCGC AAA252-P10, candidate division KSB1 bacterium SCGC AAA252-P10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.