STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000405105_01797Unannotated protein. (183 aa)    
Predicted Functional Partners:
GCA_000405105_01077
Unannotated protein.
  
     0.641
GCA_000405105_00329
Unannotated protein.
  
     0.622
GCA_000405105_01785
Unannotated protein.
  
     0.570
GCA_000405105_00922
Unannotated protein.
   
 
 0.527
GCA_000405105_01819
Unannotated protein.
   
 
 0.515
GCA_000405105_01798
Unannotated protein.
       0.514
GCA_000405105_01799
Unannotated protein.
       0.513
GCA_000405105_01686
Unannotated protein.
   
 
 0.504
GCA_000405105_01082
Unannotated protein.
    
 
 0.479
GCA_000405105_01727
Unannotated protein.
  
 
 0.453
Your Current Organism:
Cloacimonetes bacterium SCGC AAA252P10
NCBI taxonomy Id: 1046972
Other names: C. bacterium SCGC AAA252-P10, Cloacimonetes bacterium SCGC AAA252-P10, candidate division KSB1 bacterium SCGC AAA252-P10
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