STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380785_01332Unannotated protein. (708 aa)    
Predicted Functional Partners:
GCA_000380785_01334
Unannotated protein.
 
     0.919
GCA_000380785_01333
Unannotated protein.
 
     0.870
GCA_000380785_01335
Unannotated protein.
       0.705
GCA_000380785_02177
Unannotated protein.
  
    0.517
GCA_000380785_01443
Unannotated protein.
 
     0.510
GCA_000380785_01331
Unannotated protein.
       0.454
GCA_000380785_02126
Unannotated protein.
  
    0.443
GCA_000380785_00748
Unannotated protein.
   
    0.435
GCA_000380785_00749
Unannotated protein.
   
    0.435
GCA_000380785_01564
Unannotated protein.
   
    0.435
Your Current Organism:
Hydrogenedentes bacterium JGI 0000039J10
NCBI taxonomy Id: 1046982
Other names: H. bacterium JGI 0000039-J10, Hydrogenedentes bacterium JGI 0000039-J10, candidate division NKB19 bacterium JGI 0000039-J10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.