STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380785_02151Unannotated protein. (281 aa)    
Predicted Functional Partners:
GCA_000380785_02150
Unannotated protein.
 0.999
GCA_000380785_02216
Unannotated protein.
  
 0.973
GCA_000380785_02152
Unannotated protein.
       0.724
GCA_000380785_02149
Unannotated protein.
       0.698
GCA_000380785_01403
Unannotated protein.
    
  0.678
GCA_000380785_02392
Unannotated protein.
     
 0.663
GCA_000380785_00024
Unannotated protein.
    
  0.659
GCA_000380785_02153
Unannotated protein.
       0.657
GCA_000380785_00273
Unannotated protein.
 
  
 0.653
GCA_000380785_01773
Unannotated protein.
   
 
 0.631
Your Current Organism:
Hydrogenedentes bacterium JGI 0000039J10
NCBI taxonomy Id: 1046982
Other names: H. bacterium JGI 0000039-J10, Hydrogenedentes bacterium JGI 0000039-J10, candidate division NKB19 bacterium JGI 0000039-J10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.