STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380825_00419Unannotated protein. (288 aa)    
Predicted Functional Partners:
GCA_000380825_00417
Unannotated protein.
 
     0.738
GCA_000380825_00416
Unannotated protein.
 
   
 0.644
GCA_000380825_00438
Unannotated protein.
  
     0.567
GCA_000380825_00418
Unannotated protein.
       0.512
GCA_000380825_00421
Unannotated protein.
 
    
0.491
GCA_000380825_00415
Unannotated protein.
       0.485
GCA_000380825_00459
Unannotated protein.
 
   
 0.462
GCA_000380825_00259
Unannotated protein.
 
    0.456
GCA_000380825_00414
Unannotated protein.
       0.445
GCA_000380825_00420
Unannotated protein.
      
0.436
Your Current Organism:
Microgenomatus auricola
NCBI taxonomy Id: 1047003
Other names: C. Microgenomatus auricola SCGC AAA011-E14, Candidatus Microgenomatus auricola SCGC AAA011-E14, Microgenomates bacterium SCGC AAA011-E14, candidate division OP11 bacterium SCGC AAA011-E14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.