STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000402595_00670Unannotated protein. (232 aa)    
Predicted Functional Partners:
GCA_000402595_00671
Unannotated protein.
 
  
 0.954
GCA_000402595_00672
Unannotated protein.
 
  
 0.726
GCA_000402595_00673
Unannotated protein.
 
    0.716
GCA_000402595_00669
Unannotated protein.
     
 0.706
GCA_000402595_00674
Unannotated protein.
     
 0.514
GCA_000402595_02663
Unannotated protein.
 
  
 0.469
GCA_000402595_01958
Unannotated protein.
 
  
 0.454
GCA_000402595_01365
Unannotated protein.
  
  
 0.442
GCA_000402595_01343
Unannotated protein.
     
 0.404
Your Current Organism:
Aminicenantes bacterium SCGC AAA252A02
NCBI taxonomy Id: 1047013
Other names: A. bacterium SCGC AAA252-A02, Aminicenantes bacterium SCGC AAA252-A02, candidate division OP8 bacterium SCGC AAA252-A02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.