STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000402595_02604Unannotated protein. (268 aa)    
Predicted Functional Partners:
GCA_000402595_02603
Unannotated protein.
 
   
 0.952
GCA_000402595_00864
Unannotated protein.
 
   
 0.796
GCA_000402595_02605
Unannotated protein.
       0.610
GCA_000402595_02177
Unannotated protein.
  
     0.588
GCA_000402595_00109
Unannotated protein.
  
     0.531
GCA_000402595_00923
Unannotated protein.
  
     0.511
GCA_000402595_01255
Unannotated protein.
  
     0.508
GCA_000402595_02098
Unannotated protein.
  
     0.481
GCA_000402595_02450
Unannotated protein.
  
     0.475
GCA_000402595_02055
Unannotated protein.
  
     0.442
Your Current Organism:
Aminicenantes bacterium SCGC AAA252A02
NCBI taxonomy Id: 1047013
Other names: A. bacterium SCGC AAA252-A02, Aminicenantes bacterium SCGC AAA252-A02, candidate division OP8 bacterium SCGC AAA252-A02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.