STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKH93329.1dUTPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)    
Predicted Functional Partners:
OKH93330.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.874
rbpA-2
Membrane protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.774
OKH90729.1
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
whiA
Sporulation protein; Involved in cell division and chromosome segregation.
  
     0.766
OKH93099.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
OKH93005.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.762
OKH93417.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.754
OKH93079.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.754
OKH92512.1
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.753
OKH90868.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
Your Current Organism:
Streptomyces uncialis
NCBI taxonomy Id: 1048205
Other names: S. uncialis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.