STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384115_00175Unannotated protein. (176 aa)    
Predicted Functional Partners:
GCA_000384115_02407
Unannotated protein.
   
   0.881
GCA_000384115_02825
Unannotated protein.
    
 0.684
GCA_000384115_03079
Unannotated protein.
  
   
 0.682
GCA_000384115_02824
Unannotated protein.
    
 0.666
GCA_000384115_03737
Unannotated protein.
  
   
 0.645
GCA_000384115_00180
Unannotated protein.
  
     0.640
GCA_000384115_03377
Unannotated protein.
  
 
 0.617
GCA_000384115_02866
Unannotated protein.
    
 0.608
GCA_000384115_04106
Unannotated protein.
    
 0.608
GCA_000384115_02408
Unannotated protein.
  
     0.566
Your Current Organism:
Sporichthya polymorpha
NCBI taxonomy Id: 1048339
Other names: S. polymorpha DSM 43042, Sporichthya polymorpha DSM 43042, Sporichthya polymorpha IFO 12702, Sporichthya polymorpha str. DSM 43042, Sporichthya polymorpha strain DSM 43042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.