STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384115_00391Unannotated protein. (524 aa)    
Predicted Functional Partners:
GCA_000384115_04778
Unannotated protein.
    
  0.737
GCA_000384115_00149
Unannotated protein.
    
  0.716
GCA_000384115_00095
Unannotated protein.
   
  0.709
GCA_000384115_00579
Unannotated protein.
 
 
  0.702
GCA_000384115_05058
Unannotated protein.
   
 
  0.695
GCA_000384115_02665
Unannotated protein.
   
 
  0.674
GCA_000384115_05069
Unannotated protein.
   
 
  0.674
GCA_000384115_00421
Unannotated protein.
  
  
 
0.626
GCA_000384115_00756
Unannotated protein.
  
  
 
0.623
GCA_000384115_03977
Unannotated protein.
   
 
 0.617
Your Current Organism:
Sporichthya polymorpha
NCBI taxonomy Id: 1048339
Other names: S. polymorpha DSM 43042, Sporichthya polymorpha DSM 43042, Sporichthya polymorpha IFO 12702, Sporichthya polymorpha str. DSM 43042, Sporichthya polymorpha strain DSM 43042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.