STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384115_02647Unannotated protein. (553 aa)    
Predicted Functional Partners:
GCA_000384115_02646
Unannotated protein.
       0.762
GCA_000384115_02692
Unannotated protein.
    
 0.615
GCA_000384115_02643
Unannotated protein.
       0.561
GCA_000384115_02644
Unannotated protein.
       0.561
GCA_000384115_02645
Unannotated protein.
       0.561
GCA_000384115_00995
Unannotated protein.
    
 0.560
GCA_000384115_00996
Unannotated protein.
    
 0.560
GCA_000384115_01161
Unannotated protein.
    
  0.538
GCA_000384115_01563
Unannotated protein.
    
  0.538
GCA_000384115_00528
Unannotated protein.
    
 0.515
Your Current Organism:
Sporichthya polymorpha
NCBI taxonomy Id: 1048339
Other names: S. polymorpha DSM 43042, Sporichthya polymorpha DSM 43042, Sporichthya polymorpha IFO 12702, Sporichthya polymorpha str. DSM 43042, Sporichthya polymorpha strain DSM 43042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.