STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384115_03366Unannotated protein. (343 aa)    
Predicted Functional Partners:
GCA_000384115_03365
Unannotated protein.
 
   
0.919
GCA_000384115_02898
Unannotated protein.
  
 
 0.779
GCA_000384115_04926
Unannotated protein.
  
     0.676
GCA_000384115_04967
Unannotated protein.
 
   
0.653
GCA_000384115_03364
Unannotated protein.
       0.536
GCA_000384115_01495
Unannotated protein.
  
 
 0.451
GCA_000384115_02327
Unannotated protein.
  
 
  0.433
GCA_000384115_00853
Unannotated protein.
    
  0.424
GCA_000384115_02917
Unannotated protein.
    
  0.424
GCA_000384115_05148
Unannotated protein.
    
  0.424
Your Current Organism:
Sporichthya polymorpha
NCBI taxonomy Id: 1048339
Other names: S. polymorpha DSM 43042, Sporichthya polymorpha DSM 43042, Sporichthya polymorpha IFO 12702, Sporichthya polymorpha str. DSM 43042, Sporichthya polymorpha strain DSM 43042
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.