STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384115_03952Unannotated protein. (375 aa)    
Predicted Functional Partners:
GCA_000384115_03953
Unannotated protein.
 
     0.910
GCA_000384115_00046
Unannotated protein.
  
 
  0.828
GCA_000384115_00869
Unannotated protein.
  
 
  0.811
GCA_000384115_00868
Unannotated protein.
  
 
  0.803
GCA_000384115_00118
Unannotated protein.
 
 0.801
GCA_000384115_00441
Unannotated protein.
 
    
0.793
GCA_000384115_03343
Unannotated protein.
   
 
0.785
GCA_000384115_01579
Unannotated protein.
 
   
 
0.783
GCA_000384115_02788
Unannotated protein.
  
 
  0.780
GCA_000384115_00058
Unannotated protein.
 
 
 0.779
Your Current Organism:
Sporichthya polymorpha
NCBI taxonomy Id: 1048339
Other names: S. polymorpha DSM 43042, Sporichthya polymorpha DSM 43042, Sporichthya polymorpha IFO 12702, Sporichthya polymorpha str. DSM 43042, Sporichthya polymorpha strain DSM 43042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.