STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384115_04915Unannotated protein. (255 aa)    
Predicted Functional Partners:
GCA_000384115_01428
Unannotated protein.
 
 
 0.987
GCA_000384115_04914
Unannotated protein.
  
  
 0.888
GCA_000384115_04928
Unannotated protein.
  
    0.831
GCA_000384115_04918
Unannotated protein.
       0.819
GCA_000384115_01731
Unannotated protein.
    
 
 0.808
GCA_000384115_04923
Unannotated protein.
  
  
 0.784
GCA_000384115_04916
Unannotated protein.
  
    0.774
GCA_000384115_04917
Unannotated protein.
       0.773
GCA_000384115_01227
Unannotated protein.
 
 
 
 0.764
GCA_000384115_03711
Unannotated protein.
      
 0.737
Your Current Organism:
Sporichthya polymorpha
NCBI taxonomy Id: 1048339
Other names: S. polymorpha DSM 43042, Sporichthya polymorpha DSM 43042, Sporichthya polymorpha IFO 12702, Sporichthya polymorpha str. DSM 43042, Sporichthya polymorpha strain DSM 43042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.