STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW51183.1acyl-CoA dehydrogenase. (387 aa)    
Predicted Functional Partners:
SDX57329.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.935
SDX57294.1
Electron transfer flavoprotein beta subunit.
 
 
 0.914
SDW77055.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.913
SDW38007.1
Iturin family lipopeptide synthetase B/fengycin family lipopeptide synthetase D/tyrocidine synthetase-3.
  
 
 0.907
SDW03816.1
Amino acid adenylation domain-containing protein.
  
 0.851
SDX35788.1
Thioester reductase domain-containing protein.
  
 0.851
SDX15559.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.838
SDW51333.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
 
 0.833
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
 
 0.820
SDW56141.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
 0.794
Your Current Organism:
Marininema mesophilum
NCBI taxonomy Id: 1048340
Other names: CCTCC AA 2011006, DSM 45610, M. mesophilum, Marininema mesophilum Li et al. 2012, SCSIO 10219, Thermoactinomycetaceae bacterium SCSIO 10219
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.