STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW52372.1Phosphatidate cytidylyltransferase; Belongs to the CDS family. (266 aa)    
Predicted Functional Partners:
SDW52332.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.982
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
  
  
 0.932
SDW52451.1
Regulator of sigma E protease.
  
    0.892
SDX15103.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.886
SDW88809.1
CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.877
SDW58285.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
 0.863
SDW14197.1
Undecaprenol kinase/diacylglycerol kinase (ATP).
    
 0.861
SDW42387.1
Cardiolipin synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.860
SDW78185.1
Diacylglycerol kinase.
    
 0.849
SDW71117.1
Lipid kinase, YegS/Rv2252/BmrU family.
    
 0.806
Your Current Organism:
Marininema mesophilum
NCBI taxonomy Id: 1048340
Other names: CCTCC AA 2011006, DSM 45610, M. mesophilum, Marininema mesophilum Li et al. 2012, SCSIO 10219, Thermoactinomycetaceae bacterium SCSIO 10219
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