STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_0149Tricarboxylate transport protein TctC. (334 aa)    
Predicted Functional Partners:
F3D3_0147
Tricarboxylate transport membrane protein TctA.
 
 0.955
F3D3_2890
Tricarboxylate transport membrane protein TctA.
 
 0.955
F3D3_2853
TRAP transporter; 4TM/12TM fusion protein.
  
  
  0.778
F3D3_1073
TRAP-type uncharacterized transport system; Fused permease component.
  
  
  0.764
F3D3_2851
TRAP transporter solute receptor.
  
  
 0.742
F3D3_2891
Tricarboxylate transport protein TctB.
 
     0.731
F3D3_1072
TRAP transporter solute receptor; TAXI family precursor.
  
  
 0.680
F3D3_0178
TRAP-type C4-dicarboxylate transport system, large permease component.
  
  
  0.675
F3D3_0180
TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
  
  0.635
F3D3_3003
4-carboxymuconolactone decarboxylase.
   
 
  0.560
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.