STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_0175Pectin degradation protein KdgF. (110 aa)    
Predicted Functional Partners:
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.701
F3D3_4533
Flagellar motor rotation protein MotA.
    
   0.673
F3D3_0179
TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter.
 
     0.634
F3D3_4516
Chemotaxis protein CheC; Inhibitor of MCP methylation.
    
   0.615
F3D3_4529
Flagellar motor switch protein FliN.
    
   0.615
F3D3_4119
Transcriptional regulator; MerR family.
  
 0.596
F3D3_0176
D-mannonate oxidoreductase.
       0.583
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
     0.548
F3D3_0289
2-deoxy-D-gluconate 3-dehydrogenase.
 
  
 0.542
F3D3_3725
Adenylosuccinate lyase; Predicted queuosine-regulated ECF transporter; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
 0.540
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.