STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_0325Multi antimicrobial extrusion protein Na(+)/drug antiporter; MATE family of MDR efflux pumps. (459 aa)    
Predicted Functional Partners:
F3D3_0327
Beta-xylosidase.
 
     0.792
F3D3_0326
Rhamnogalacturonan acetylesterase.
 
     0.789
F3D3_0433
Multi antimicrobial extrusion protein Na(+)/drug antiporter; MATE family of MDR efflux pumps.
  
     0.769
F3D3_2283
Na+ driven multidrug efflux pump.
  
     0.744
F3D3_0328
Rhamnogalacturonides degradation protein RhiN.
 
     0.728
F3D3_0331
ABC transporter, substrate-binding protein.
 
     0.687
F3D3_0329
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
 
     0.666
F3D3_0330
Hypothetical protein.
       0.607
F3D3_0324
Hexuronate utilization operon transcriptional repressor ExuR.
       0.586
F3D3_0846
PAP2 family protein.
   
 
 0.512
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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