STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_0538Phosphoesterase PHP; N-terminal precursor. (265 aa)    
Predicted Functional Partners:
F3D3_0754
Pyruvate-flavodoxin oxidoreductase.
    
  0.706
F3D3_0537
Diacetylchitobiose-specific IIB component PST system.
       0.634
F3D3_1970
L-threonine 3-O-phosphate decarboxylase.
    
 0.623
F3D3_2551
Histidinol-phosphate aminotransferase.
    
 0.623
F3D3_0134
PTS system, beta-glucoside-specific IIC component/beta-glucoside-specific IIA component.
    
  0.610
F3D3_2032
PTS system, beta-glucoside-specific IIC component / beta-glucoside-specific IIA component.
    
  0.610
F3D3_2526
PTS system, beta-glucoside-specific IIC component / beta-glucoside-specific IIA component.
    
  0.610
F3D3_3030
PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component.
    
  0.610
tgt
tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]
    
  0.572
F3D3_2687
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.520
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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