STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_0866Oligopeptide transport system permease protein OppB; Belongs to the ABC transporter superfamily. (350 aa)    
Predicted Functional Partners:
F3D3_0867
Oligopeptide transport system permease protein OppC.
 
 0.991
F3D3_3902
Oligopeptide transport system permease protein OppC.
 
 0.978
F3D3_0868
Oligopeptide transport system permease protein OppB.
 0.971
F3D3_3579
Oligopeptide transport system permease protein OppC.
 
 0.964
F3D3_0838
Dipeptide transport system permease protein DppC.
 
 0.949
F3D3_4126
Oligopeptide transport system permease protein OppC.
 
 0.948
F3D3_0542
Dipeptide transport system permease protein DppC.
 
 0.943
F3D3_4142
Dipeptide transport system permease protein DppC.
 
 
 0.935
F3D3_0048
Oligopeptide transport system permease protein OppC.
 
 0.933
F3D3_1090
Dipeptide transport system permease protein DppC.
 
 0.931
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.