STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_0868Oligopeptide transport system permease protein OppB. (306 aa)    
Predicted Functional Partners:
F3D3_0867
Oligopeptide transport system permease protein OppC.
 
 0.985
F3D3_0866
Oligopeptide transport system permease protein OppB; Belongs to the ABC transporter superfamily.
 0.971
F3D3_0869
Oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA.
 
 0.969
F3D3_2172
Oligopeptide transport system permease protein OppC.
 
 0.940
F3D3_3902
Oligopeptide transport system permease protein OppC.
 
 0.940
F3D3_0048
Oligopeptide transport system permease protein OppC.
 
 0.939
F3D3_0865
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 0.936
F3D3_2443
Oligopeptide transport system permease protein OppC.
 
 0.923
F3D3_3900
Oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA.
 0.922
F3D3_2170
Oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA.
 
 0.920
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.