Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F3D3_0754 | F3D3_0967 | F3D3_0754 | F3D3_0967 | Pyruvate-flavodoxin oxidoreductase. | Citrate synthase; Belongs to the citrate synthase family. | 0.943 |
F3D3_0754 | F3D3_0968 | F3D3_0754 | F3D3_0968 | Pyruvate-flavodoxin oxidoreductase. | Isocitrate dehydrogenase [NAD]. | 0.879 |
F3D3_0754 | F3D3_0969 | F3D3_0754 | F3D3_0969 | Pyruvate-flavodoxin oxidoreductase. | Aconitate hydratase. | 0.914 |
F3D3_0754 | F3D3_2973 | F3D3_0754 | F3D3_2973 | Pyruvate-flavodoxin oxidoreductase. | Glutamate synthase [NADPH] large chain. | 0.935 |
F3D3_0754 | F3D3_3037 | F3D3_0754 | F3D3_3037 | Pyruvate-flavodoxin oxidoreductase. | Acetolactate synthase large subunit. | 0.900 |
F3D3_0754 | F3D3_4414 | F3D3_0754 | F3D3_4414 | Pyruvate-flavodoxin oxidoreductase. | Threonine dehydratase. | 0.895 |
F3D3_0754 | F3D3_4706 | F3D3_0754 | F3D3_4706 | Pyruvate-flavodoxin oxidoreductase. | 4-hydroxy-2-oxovalerate aldolase. | 0.887 |
F3D3_0754 | leuA | F3D3_0754 | F3D3_4419 | Pyruvate-flavodoxin oxidoreductase. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.887 |
F3D3_0754 | leuC | F3D3_0754 | F3D3_4418 | Pyruvate-flavodoxin oxidoreductase. | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.840 |
F3D3_0754 | leuD | F3D3_0754 | F3D3_4417 | Pyruvate-flavodoxin oxidoreductase. | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily. | 0.789 |
F3D3_0967 | F3D3_0754 | F3D3_0967 | F3D3_0754 | Citrate synthase; Belongs to the citrate synthase family. | Pyruvate-flavodoxin oxidoreductase. | 0.943 |
F3D3_0967 | F3D3_0968 | F3D3_0967 | F3D3_0968 | Citrate synthase; Belongs to the citrate synthase family. | Isocitrate dehydrogenase [NAD]. | 0.917 |
F3D3_0967 | F3D3_0969 | F3D3_0967 | F3D3_0969 | Citrate synthase; Belongs to the citrate synthase family. | Aconitate hydratase. | 0.993 |
F3D3_0967 | F3D3_2973 | F3D3_0967 | F3D3_2973 | Citrate synthase; Belongs to the citrate synthase family. | Glutamate synthase [NADPH] large chain. | 0.892 |
F3D3_0967 | F3D3_4706 | F3D3_0967 | F3D3_4706 | Citrate synthase; Belongs to the citrate synthase family. | 4-hydroxy-2-oxovalerate aldolase. | 0.728 |
F3D3_0967 | leuA | F3D3_0967 | F3D3_4419 | Citrate synthase; Belongs to the citrate synthase family. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.728 |
F3D3_0967 | leuC | F3D3_0967 | F3D3_4418 | Citrate synthase; Belongs to the citrate synthase family. | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.770 |
F3D3_0967 | leuD | F3D3_0967 | F3D3_4417 | Citrate synthase; Belongs to the citrate synthase family. | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily. | 0.694 |
F3D3_0968 | F3D3_0754 | F3D3_0968 | F3D3_0754 | Isocitrate dehydrogenase [NAD]. | Pyruvate-flavodoxin oxidoreductase. | 0.879 |
F3D3_0968 | F3D3_0967 | F3D3_0968 | F3D3_0967 | Isocitrate dehydrogenase [NAD]. | Citrate synthase; Belongs to the citrate synthase family. | 0.917 |
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