STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_1067Propionate catabolism operon regulatory protein PrpR. (600 aa)    
Predicted Functional Partners:
F3D3_4594
Chemotaxis protein methyltransferase CheR.
  
 0.888
F3D3_1068
Domain of unknown function DUF1537.
 
     0.883
F3D3_4529
Flagellar motor switch protein FliN.
  
 
 0.863
F3D3_0662
Sensory box/GGDEF family protein.
  
 0.857
F3D3_4283
Sensory box histidine kinase/response regulator.
  
 0.857
F3D3_1071
4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
 
   
 0.854
F3D3_4072
Sensory box histidine kinase/response regulator.
  
 0.846
F3D3_2497
Hypothetical protein.
  
 0.828
F3D3_4521
Flagellar synthesis regulator FleN.
  
 0.828
F3D3_4652
Adenylate cyclase.
  
 0.797
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.