STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_1069Alcohol dehydrogenase. (384 aa)    
Predicted Functional Partners:
F3D3_4264
Acetaldehyde dehydrogenase (EC 1.2.1.10).
 0.982
F3D3_0486
Acetaldehyde dehydrogenase, ethanolamine utilization cluster.
 0.980
F3D3_1068
Domain of unknown function DUF1537.
     0.899
F3D3_0754
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.898
F3D3_2580
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.813
F3D3_2973
Glutamate synthase [NADPH] large chain.
   
 
 0.779
F3D3_2270
Glutamate synthase [NADPH] small chain.
    
 0.738
F3D3_2518
Formate dehydrogenase-O major subunit.
    
 0.738
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
    0.729
F3D3_1071
4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
 
     0.722
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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