STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_1282Hypothetical protein. (64 aa)    
Predicted Functional Partners:
F3D3_1280
Aspartate aminotransferase.
       0.723
F3D3_1281
Ornithine cyclodeaminase.
       0.723
F3D3_1279
Membrane protein.
       0.577
F3D3_1283
Aspartate aminotransferase; Transcriptional regulator, GntR family domain.
       0.444
F3D3_1284
Thiamin-phosphate pyrophosphorylase.
       0.444
F3D3_1285
2-iminoacetate synthase ThiH.
       0.444
thiG
Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
       0.444
F3D3_1287
Sulfur carrier protein adenylyltransferase ThiF.
       0.402
F3D3_1288
Hypothetical protein.
       0.402
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.