STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_1467Response regulator of zinc sigma-54-dependent two-component system. (512 aa)    
Predicted Functional Partners:
F3D3_2311
RNA polymerase sigma-54 factor RpoN.
 
  
 0.833
F3D3_4594
Chemotaxis protein methyltransferase CheR.
    
 0.766
F3D3_0662
Sensory box/GGDEF family protein.
    
 0.715
F3D3_1468
Response regulator of zinc sigma-54-dependent two-component system.
 
    
0.679
F3D3_4283
Sensory box histidine kinase/response regulator.
    
 0.631
F3D3_4652
Adenylate cyclase.
    
 0.626
rsmI
rRNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.559
F3D3_0912
Multi-sensor hybrid histidine kinase.
    
 0.537
F3D3_2489
Transcriptional regulator.
    
 0.537
F3D3_4072
Sensory box histidine kinase/response regulator.
    
 0.537
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.