Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
F3D3_0754 | F3D3_1668 | Pyruvate-flavodoxin oxidoreductase. | Deoxyadenosine kinase. | 0.948 |
F3D3_0754 | F3D3_1751 | Pyruvate-flavodoxin oxidoreductase. | Hypothetical protein. | 0.785 |
F3D3_0754 | F3D3_1752 | Pyruvate-flavodoxin oxidoreductase. | 2-oxoglutarate oxidoreductase, delta subunit, putative. | 0.979 |
F3D3_0754 | F3D3_1753 | Pyruvate-flavodoxin oxidoreductase. | 2-oxoglutarate oxidoreductase, alpha subunit. | 0.995 |
F3D3_0754 | F3D3_1754 | Pyruvate-flavodoxin oxidoreductase. | 2-oxoglutarate oxidoreductase, beta subunit. | 0.996 |
F3D3_0754 | F3D3_1755 | Pyruvate-flavodoxin oxidoreductase. | 2-oxoglutarate oxidoreductase, gamma subunit. | 0.990 |
F3D3_0754 | F3D3_2650 | Pyruvate-flavodoxin oxidoreductase. | NAD-reducing hydrogenase subunit HoxF. | 0.990 |
F3D3_0754 | F3D3_2764 | Pyruvate-flavodoxin oxidoreductase. | NAD-reducing hydrogenase subunit HoxF. | 0.998 |
F3D3_0754 | F3D3_2766 | Pyruvate-flavodoxin oxidoreductase. | NAD-reducing hydrogenase subunit HoxF. | 0.990 |
F3D3_0754 | F3D3_4270 | Pyruvate-flavodoxin oxidoreductase. | NADH-ubiquinone oxidoreductase chain L. | 0.987 |
F3D3_1668 | F3D3_0754 | Deoxyadenosine kinase. | Pyruvate-flavodoxin oxidoreductase. | 0.948 |
F3D3_1668 | F3D3_1752 | Deoxyadenosine kinase. | 2-oxoglutarate oxidoreductase, delta subunit, putative. | 0.948 |
F3D3_1668 | F3D3_2650 | Deoxyadenosine kinase. | NAD-reducing hydrogenase subunit HoxF. | 0.936 |
F3D3_1668 | F3D3_2764 | Deoxyadenosine kinase. | NAD-reducing hydrogenase subunit HoxF. | 0.999 |
F3D3_1668 | F3D3_2766 | Deoxyadenosine kinase. | NAD-reducing hydrogenase subunit HoxF. | 0.936 |
F3D3_1751 | F3D3_0754 | Hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.785 |
F3D3_1751 | F3D3_1752 | Hypothetical protein. | 2-oxoglutarate oxidoreductase, delta subunit, putative. | 0.965 |
F3D3_1751 | F3D3_1753 | Hypothetical protein. | 2-oxoglutarate oxidoreductase, alpha subunit. | 0.883 |
F3D3_1751 | F3D3_1754 | Hypothetical protein. | 2-oxoglutarate oxidoreductase, beta subunit. | 0.886 |
F3D3_1751 | F3D3_1755 | Hypothetical protein. | 2-oxoglutarate oxidoreductase, gamma subunit. | 0.902 |
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