STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_1794Hypothetical protein. (678 aa)    
Predicted Functional Partners:
F3D3_1793
Cell division protein FtsX.
    0.952
F3D3_1795
Methionine ABC transporter ATP-binding protein.
 
    0.831
F3D3_1397
S-layer domain protein.
  
  
  0.612
F3D3_2373
Hypothetical protein.
  
  
  0.606
F3D3_2355
Hypothetical protein.
  
  
  0.561
F3D3_4341
Hypothetical protein.
  
  
  0.530
F3D3_4231
Hypothetical protein.
  
  
  0.525
F3D3_4076
Topoisomerase IV subunit B.
 
     0.509
F3D3_4067
Type IV pilus biogenesis protein PilO.
  
     0.498
F3D3_0349
S-layer homology domain.
 
     0.493
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.