STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_2018Hypothetical protein. (800 aa)    
Predicted Functional Partners:
F3D3_4652
Adenylate cyclase.
   
 0.831
F3D3_4594
Chemotaxis protein methyltransferase CheR.
   
 0.825
F3D3_4072
Sensory box histidine kinase/response regulator.
   
 0.816
F3D3_0662
Sensory box/GGDEF family protein.
   
 0.808
F3D3_3633
Hypothetical protein.
 
 
 0.797
F3D3_4283
Sensory box histidine kinase/response regulator.
  
 0.797
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.761
F3D3_3873
Clostripain.
   
 
 0.752
F3D3_4327
FHA-domain-containing proteins.
   
 
 0.752
F3D3_2595
Hypothetical protein.
  
 0.725
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.